GORULE violations assigned by AgBase

Contents

gorule-0000005 IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

gorule-0000008 No annotations should be made to uninformative high level terms

gorule-0000046 The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

MESSAGES

gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

• total: 1

messages

• WARNING - Violates GO Rule:GORULE:0000005: IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to 'binding ; GO:0005488' or 'protein binding ; GO:0005515'--`MGI MGI:98725 Tgfb1 enables GO:0005515 GO_REF:0000024 ISS UniProtKB:P01137 F Transforming growth factor beta-1 proprotein protein taxon:10090 20141202 AgBase `

gorule-0000008

No annotations should be made to uninformative high level terms

• total: 2

messages

• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`MGI MGI:96157 Hmgb2 enables GO:0008134 PMID:23495099 IDA F High mobility group protein B2 protein taxon:10090 20150512 AgBase `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`MGI MGI:1197010 Sumo1 enables GO:0008134 PMID:15023536 IMP F Small ubiquitin-related modifier 1 protein taxon:10090 20150116 AgBase `

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

• total: 1

messages

• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`MGI MGI:1332235 Nrf1 enables GO:0042803 GO_REF:0000024 ISS UniProtKB:Q90979 F Nuclear respiratory factor 1 protein taxon:10090 20150422 AgBase `