GORULE violations assigned by DisProt
Contents
gorule-0000006
IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC
gorule-0000046
The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.
gorule-0000061
Allowed gene product to term relations (gp2term)
MESSAGES
gorule-0000006
IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC
messages
- ERROR - Violates GO Rule:GORULE:0000006: IEP and HEP usage is restricted to terms from the Biological Process ontology--`MGI MGI:97769 Prnp enables GO:0140677 PMID:28945221 IEP F Major prion protein protein taxon:10090 20220228 DisProt
`
gorule-0000046
The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.
messages
- WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`MGI MGI:107376 Msi1 enables GO:0042803 PMID:32225071 IDA F RNA-binding protein Musashi homolog 1 protein taxon:10090 20220228 DisProt has_input(UniProtKB:Q61474)
`
- WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`MGI MGI:1925662 Cyren involved_in GO:0051260 PMID:30017584 EXP P Cell cycle regulator of non-homologous end joining protein taxon:10090 20220228 DisProt
`
- WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`MGI MGI:1929258 Kcnip3 enables GO:0042803 PMID:15746104 EXP F Calsenilin protein taxon:10090 20220228 DisProt has_input(UniProtKB:Q9QXT8)
`
gorule-0000061
Allowed gene product to term relations (gp2term)
messages
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`MGI MGI:1925662 Cyren is_active_in GO:1990391 PMID:30017584 IPI UniProtKB:P23475,UniProtKB:P70388,UniProtKB:P97313,UniProtKB:Q3KNJ2,UniProtKB:Q61216,UniProtKB:Q62388,UniProtKB:Q8K0Y7,UniProtKB:Q9R207 C Cell cycle regulator of non-homologous end joining protein taxon:10090 20220228 DisProt
`